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Trouble installing OHDSI WebAPI/Atlas using BroadSea

Implementers
#1

Hi,

I am following the instruction here to install OHDSI stack in docker container, and Atlas is not starting because of Unable to obtain Jdbc connection from DataSource:

and here is part of my log file:

	Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'flyway' defined in class path resource 
[org/ohdsi/webapi/FlywayConfig.class]: Invocation of init method failed; nested exception is org.flywaydb.core.internal.dbsupport.FlywaySqlExcepti
on: 
Unable to obtain Jdbc connection from DataSource
------------------------------------------------
SQL State  : 28000
Error Code : 0
Message    : FATAL: no pg_hba.conf entry for host "192.168.1.153", user "ohdsi_admin_user", database "OHDSI", SSL off

		at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.
java:1630)
		at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.ja
va:553)
		at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java
:481)
		at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:312)
		at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
		at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:308)
		at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197)
		at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:297)
		at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:202)
		at org.springframework.beans.factory.config.DependencyDescriptor.resolveCandidate(DependencyDescriptor.java:208)
		at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1139)
		at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1067)
		at org.springframework.beans.factory.support.ConstructorResolver.resolveAutowiredArgument(ConstructorResolver.java:835)
		at org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:741)
		... 60 more

and here is my docker-compose.yml file:

version: '2'

services:

  broadsea-methods-library:
    image: ohdsi/broadsea-methodslibrary
    ports:
      - "8787:8787"
      - "6311:6311"
    environment:
      - PASSWORD=mypass

  broadsea-webtools:
    image: ohdsi/broadsea-webtools
    ports:
      - "8089:8089"
    volumes:
     - .:/tmp/drivers/:ro
     - ./config-local.js:/usr/local/tomcat/webapps/atlas/js/config-local.js:ro
    environment:
      - WEBAPI_URL=http://192.168.1.153:9001
      - env=webapi-postgresql
      - security_origin=*
      - datasource_driverClassName=org.postgresql.Driver
      - datasource_url=jdbc:postgresql://192.168.1.153:5432/OHDSI
      - datasource.cdm.schema=omop_cdm
      - datasource.ohdsi.schema=webapi
      - datasource_username=ohdsi_app_user
      - datasource_password=****
      - spring.jpa.properties.hibernate.default_schema=ohdsi
      - spring.jpa.properties.hibernate.dialect=org.hibernate.dialect.PostgreSQLDialect
      - spring.batch.repository.tableprefix=ohdsi.BATCH_
      - flyway_datasource_driverClassName=org.postgresql.Driver
      - flyway_datasource_url=jdbc:postgresql://192.168.1.153:5432/OHDSI
      - flyway_schemas=ohdsi
      - flyway.placeholders.ohdsiSchema=ohdsi
      - flyway_datasource_username=ohdsi_admin_user
      - flyway_datasource_password=****
      - flyway.locations=classpath:db/migration/postgresql

the database is running on localhost, but jdbc:postgresql://localhost:5432/OHDSI would not work either, so I replaced localhost with 192.168.1.153, the IP address of the machine where the database is running. And then I got the above error message, mainly the following:

Unable to obtain Jdbc connection from DataSource
------------------------------------------------
SQL State  : 28000
Error Code : 0
Message    : FATAL: no pg_hba.conf entry for host "192.168.1.153", user "ohdsi_admin_user", database "OHDSI", SSL off

could someone please kindly let me know what should I change to fix this?

Thanks!

#2

Let me answer my own question, so this might be helpful to those who see the same issue.

here is what we should be using instead of localhost:

- datasource_url=jdbc:postgresql://${DOCKER_GATEWAY_HOST:-host.docker.internal}:5432/OHDSI

the ${DOCKER_GATEWAY_HOST:-host.docker.internal} part replaces localhost and solves the problem.

And I am seeing other problems now, which I will ask in another thread. Thanks for your attention.

t