I got the following message when I try to install org.Sc.sgd.db in Rstudio.
BiocManager::install(“org.Sc.sgd.db”)
Bioconductor version 3.11 (BiocManager 1.30.10), R 4.0.2 (2020-06-22)
Installing package(s) ‘org.Sc.sgd.db’
installing the source package ‘org.Sc.sgd.db’
probando la URL ‘https://bioconductor.org/packages/3.11/data/annotation/src/contrib/org.Sc.sgd.db_3.11.4.tar.gz’
Content type ‘application/x-gzip’ length 19908691 bytes (19.0 MB)
downloaded 19.0 MB
- installing source package ‘org.Sc.sgd.db’ …
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘org.Sc.sgd.db’
finding HTML links … done
org.Sc.sgdALIAS html
org.Sc.sgdBASE html
org.Sc.sgdCHR html
org.Sc.sgdCHRLENGTHS html
org.Sc.sgdCHRLOC html
org.Sc.sgdCOMMON2ORF html
org.Sc.sgdDESCRIPTION html
org.Sc.sgdENSEMBL html
org.Sc.sgdENSEMBLPROT html
org.Sc.sgdENSEMBLTRANS html
org.Sc.sgdENTREZID html
org.Sc.sgdENZYME html
org.Sc.sgdGENENAME html
org.Sc.sgdGO html
org.Sc.sgdGO2ALLORFS html
org.Sc.sgdINTERPRO html
org.Sc.sgdMAPCOUNTS html
org.Sc.sgdORGANISM html
org.Sc.sgdPATH html
org.Sc.sgdPMID html
org.Sc.sgdREFSEQ html
org.Sc.sgdREJECTORF html
org.Sc.sgdSGD html
org.Sc.sgdSMART html
org.Sc.sgdUNIPROT html
org.Sc.sgd_dbconn html
** building package indices
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for ‘org.Sc.sgd.db’:
.onLoad failed in loadNamespace() for ‘org.Sc.sgd.db’, details:
call: NULL
error: Failed to load extension: No se puede encontrar el módulo especificado.
Error: loading failed
Ejecución interrumpida
ERROR: loading failed
- removing ‘C:/Users/Jesús/Documents/R/win-library/4.0/org.Sc.sgd.db’
The downloaded source packages are in
‘C:\Users\Jesús\AppData\Local\Temp\RtmpYn6cOf\downloaded_packages’
Old packages: ‘igraph’, ‘xfun’
Update all/some/none? [a/s/n]:
n
Warning message:
In install.packages(…) :
installation of package ‘org.Sc.sgd.db’ had non-zero exit status
How can I solve this problem?
Thanks everybody