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Preparing for COVID vaccine codes in the vocabulary and modeling in the OMOP CDM


(Vojtech Huser) #21

Karthik, can you elaborate on the CPT codes you mention. This page (https://www.ama-assn.org/find-covid-19-vaccine-codes) shows codes 0001A and 0011A. But are those modifiers (those only have two characters) in addition to CPT codes 91300 to 91303.


(Dmytry Dymshyts) #22

are already in OMOP vocabulary


Vocabulary refresh with SNOMED domain adjustments
(Karthik) #23

Oh, great to hear! The last version I downloaded didn’t have it or had missing relationships. Now the only piece is the CVX to RxNorm mappings, so we can use one vocabulary for drug analyses.


(Melanie Philofsky) #24

@Alexdavv or @Dymshyts

I found another custom source value which lacks a code, "JOHNSON & JOHNSON, SARS-COV2 (COVID-19) VACCINE ". What’s the appropriate concept_id for it?


(Alexander Davydov) #25

Here you are:
https://athena.ohdsi.org/search-terms/terms/739906


(Melanie Philofsky) #26

Thanks, @Alexdavv!


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