I’m Filippo, currently 3rd year PhD student on learning disorders in the UK. For my PhD I have access to several biobanks (UKBiobank, ALSPAC, and some small in-house clinical ones). I was thinking about moving the data into OMOP but I have a couple of questions.
I know all the advantages of using OMOP (or other CDM like i2b2, Sentinel or PCORnet) but I was wondering which are the current OMOP limitations, apart from storing genomic data?
I’ve seen some effort has been put to transform UKBiobank data into OMOP but it seems there is a lot of data loss. What are the best practices when there is a lot of loss of information when mapping multiple biobanks to OMOP? I guess you would just use the
source_idand have a missing value in the