This week we released two new vocabularies to Athena:
This week we released a couple new vocabularies to Athena:
ICD10GM - The German version of the ICD10 classification. It has been created using stacked versions of the ICD10 catalogs provided by Dresden University. Codes that were not present in the ICD10 International version have been auto-translated and uphill mapping applied to less specific parent codes. This delta list of codes is preserved for a later follow up to apply more specific mappings.
A first version of a set of Cancer and Gene variant vocabularies that at this point are focused to support cancer classification use cases and are not entirely complete. These vocabularies will receive ongoing updates over the course of the following months.
|CIViC||Clinical Interpretation of Variants in Cancer (civicdb.org)|
|CGI||Cancer Genome Interpreter (Pompeu Fabra University)|
|JAX||The Clinical Knowledgebase (The Jackson Laboratory)|
|NCIt||NCI Thesaurus (National Cancer Institute)|
|HGNC||Human Gene Nomenclature (European Bioinformatics Institute)|
@Christian_Reich will be able to provide more background soon.