MIMIC2 (and possibly MIMIC3) data in OHDSI CDM format

[Vojtech_Huser (Vojtech (Vojta) Huser)]

This thread is very long and goes back way in time.
Please use this new thread to document the 2020 project for conversion - called Argos.

2020 OMOPed MIMIC project

This thread is to be used to document work on converting MIMIC demo (and full) data to OMOP. Prior ETL (https://github.com/MIT-LCP/mimic-omop) has last commits from 2 years ago and will be refreshed. Physionet v1.0 release will be based on that code. If we improve the mapping, Physionet release 2 will contain those additions. For now, we will still use that GitHub repo as the one and only repo for the ETL. Links: OMOPed MIMIC (Argos) Google drive folder link is: https://drive.google.com/open…