This thread is to be used to document work on converting MIMIC demo (and full) data to OMOP.
Prior ETL (https://github.com/MIT-LCP/mimic-omop) has last commits from 2 years ago and will be refreshed. Physionet v1.0 release will be based on that code. If we improve the mapping, Physionet release 2 will contain those additions. For now, we will still use that GitHub repo as the one and only repo for the ETL.
Argos Google drive folder link is: https://drive.google.com/open?id=1j-x-rwuYJr2nIs5zxCW6ST_Q-vPc1tfN
Github issue for the conversion: https://github.com/MIT-LCP/mimic-omop/issues/52
This forum thread will be primary way to communicate updates.
Argos is the dog of Odysseus. It is no acronym. We just need a name for the project.