The National Library of Medicine (NLM) has created an ETL using Spark SQL to transform T-MSIS Analysis Files (TAF) Research Identifiable Files (RIF) into OMOP CDM. The goal of the ETL was to ease integration of TAF data into network studies. For OMOP practitioners who have access to a 100% sample of TAF RIF via the Chronic Conditions Warehouse, consider using our ETL as a starting point on your OMOP conversion, if desired. We do not anticipate major updates or ongoing development of this code. The NLM is not providing any long-term support for OMOP ETL implementation at this time.
Documentation to support deployment is forthcoming.
Link to the ETL: CRI/EtlOmopMedicaid at master · lhncbc/CRI · GitHub