Hello Everyone,
I am looking to find the top level term for my diagnosis codes which have ICD9/10 codes.
For example,
ICD-9 ICD9 description OMOP concept Name OMOP concept Id
01000 Prim Tuberculosis Complex-unspec Tuberculosis 434557
01001 Prim Tuberculosis Complex-no Exam 1 Tuberculosis 434557
You can see how I have tried to map different conditions related to Tuberculosis to their parent term. In drugs domain, we call ingredients
as the top level of the hierarchy. So, we map metformin 250 mg
to metformin
.
Does such hierarchy exists for diagnosis/conditions domain? If yes, what is the concept class called? I only see clinical finding
for all standard diagnosis concepts under conditions domain in OMOP… So, unable to choose a filter in Usagi to map my source terms to top level items
Can you share some insights on how to map different manifestations of a clinical condition to its corresponding top level(parent) term? Is it possible using Usagi? Has anyone tried this before?
While we don’t intend to do our actual mapping this way, but for some analytics reasons, I would like to group different diagnosis codes to their parent term.