OHDSI Home | Forums | Wiki | Github

CPT4 cpt.bat process issue

Vocabulary Users
#1

Hi all, we just downloaded the latest dictionaries from the Athena website and getting issue running cpt4.

Here is the error message - [INFO ] 2023-06-15 02:26:47.161 [main] ConceptService - Not processed cpt4 concepts: 1. See logs/not-processed-concepts-06-14-2023-22-32-33.out, file. You can find more information about errors in the logs/logfile.log file

This is the code it is giving error for -

705253 Drug CPT4 CPT4 0174A 20230314 20991231

Any help will be really appreciated, thanks

CPT4.bat only extracts about half of CPT4 concepts. Others fail and no error message is given
#2

@sadrangans the concept you provided is not standard in Athena and we don’t use non-standard concepts while mapping. Maybe this is the reason

#3

@dmitry.buralkin thanks for coming back. Yes I had a look on the Athena website. we have downloaded all the dictionaries. Is there a dictionary that shouldn’t be there. Can you please let me know what I need to do to fix it please.

#4

Hi @sadrangans

While we’re working on it, this workaround can be applied.

#5

Here’s an update on the issee.

#6

Many thanks

t