Hello @ericaVoss,
Could you please let me know if the vocabulary additions listed on GITHUB link below are open for public use or one needs to get consent/license in order to use them?
Thank you for your valuable contributions!!
Yes, but we have more updated ones and I just cleaned up the folder for you:
We only have TRUVEN and CPRD right now, the others are on their way.
I’m actually going to move this older folder you pointed out under:
https://github.com/OHDSI/ETL-CDMBuilder/tree/master/man/CDMv4
another question is @ericaVoss - could you please let me know if there is a plan of integrating/adding these additional vocabularies into the athena portal (vocabularies CDM V4.5) in near future?
We do work with @Christian_Reich and there are a few CPRD Vocabularies in the works. But for the most part these will stay separate because they are source specific and they are mappings that Janssen has defined using USAGI.
Converting these to v4.5 on your own would be simple though. You just need to change the table structure slightly and give the VOCABULARY_ID a number instead of text. The only thing important in this table is SOURCE_CODE, SOURCE_CODE_DESCRIPTION, and TARGET_CONCEPT_ID which is the mapping and the v4.5 table is set up similarly.
We could put those tables into the general vocabulary no problem, unless they are really small and really local. Should we do that?