Cannot FTP to get the OSIM2 datasets

[chua09 (Wei-Chao Chuang)]

Hi! All,

I cannot FTP to get the OSIM2 datasets as following. It looks like the 54.205.167.229 server is down.
Any suggestion?

Simulated Observational Data - OSIM2
http://omop.org/OSIM2

To log in to the anonymous FTP server use the following credentials:

Server: 54.205.167.229
Login: anonymous
Password: blank
Our FTP server supports SFTP protocol (port 22)

Thanks
Wei-Chao

[Christian_Reich]

@chua09:

The omop.org website is no longer actively supported. Let me find out if there is a way to get those files for you. Can you share what you are trying to do? There are other ways to get to fake data for purposes of development and testing. Let us know.

[chua09 (Wei-Chao Chuang)]

Christian,

Thank you for helping!

Depending on the size of the data, we can create a shared directory on buckeye box. We are developing a research disease registry framework that leverages the OMOP model. In order to demonstrate the framework, we’d like to populate it with non-identified data (data that is not linked to any patients, but makes some sense – for instance having “diabetes”, “cancer”, “creatinine” etc. in the data instead of random character sequences).

Thanks
Wei-Chao

[Patrick_Ryan]

I’d recommend you use this:

1K sample of simulated CMS SynPUF data in CDMV5 format available for download

I've created a 1k sample of CMS SynPUF data in CDM Version 5 format for download at my company web site It's a first release and not all of the CDM version 5 tables are populated (in particular the COST tables are not populated). If you find any issues with this data set feel free to post them on this thread. I thought it might be a useful small data set for folks who want to run OHDSI application demos with data that can be shared publicly (this is just simulated data) and to use as test da…

[chua09 (Wei-Chao Chuang)]

Thank you for helping!

We are still using the CDM Version 4, and we don’t have plan to upgrade CDM version 5 yet.
So we need the dataset in CDM Version 4 format.

Thank you! Anyway!

[Patrick_Ryan]

You can use this dataset, just don’t import data from tables not in CDMv4.

[suwaibiths (Suwaibith Suhail)]

Hi Christian,

We tried accessing the FTP and encountered the same issue, appreciate if you could let me know how to download observational datasets that was available in the FTP. We are currently researching the elements of using machine learning in medical care, the data will be used to train the platform we are currently developing and also test different use cases.

Thank you,
Suhail

[Christian_Reich]

@suwaibiths:

Preparing an OSIM2 folder in ftp://ftp.ohdsi.org. The upload will take a while. Sorry for the delay.

[Ajinkya_Patale]

Is this still available? I am not able to connect this URL via FileZilla

[Christian_Reich]

It’s right there. I can’t help with Filezilla, but this is simple anonymous FTP. Copy ftp://ftp.ohdsi.org/osim2 into a browser and you can download it even that way.

[Ajinkya_Patale]

Thanks @Christian_Reich