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Appropriate concept_ID for each type of HBV DNA test

Vocabulary Users
,
#1

Hello.

We are in the process of measurement mapping. Among them, HBV DNA and quantitation (hepatitis B virus) are being mapped. There are three types of HBV DNA tests: ‘PCR-hybridization’, ‘RQ-PCR’ and ‘hybrid capture ass’.
(‘PCR’ is ‘polymerase chain reaction’.)

Source: Measurement code name

  • HBV DNA, quantitation (hepatitis B virus) [PCR-hybridization]
  • HBV DNA, quantitation (hepatitis B virus) [RQ-PCR]
  • HBV DNA Quantitation (Hybrid Capture Ass)

Is there a Concept_id for each one? If so, what is the appropriate concept_id of each?

I would greatly appreciate your help.

Regards,
Hye-sun Kim.

#2

I would pick up something from here
http://athena.ohdsi.org/search-terms/terms?standardConcept=Standard&vocabulary=LOINC&page=1&pageSize=50&query=HBV+DNA

looks like
for
HBV DNA Quantitation (Hybrid Capture Ass)
these two are good (choose one depending on the units of measure you use)
20442-0
Hepatitis B virus DNA [#/volume] (viral load) in Serum by Probe and signal amplification method 10*6_eq/mL
40459-0 Hepatitis B virus DNA [Log #/​volume] (viral load) in Serum by Probe and signal amplification method
{Log_copies}/mL
these two were chosen as they have related name “Hybidization Protection Assay”
https://s.details.loinc.org/LOINC/20442-0.html?sections=Comprehensive
https://s.details.loinc.org/LOINC/40459-0.html?sections=Comprehensive

and for PCR-hybridization and RQ-PCR
I didn’t find exact methods indication in a standard concepts, so I would chose the general concept
11258-1 Hepatitis B virus DNA [Units/volume] in Serum

resources used: http://athena.ohdsi.org/ - our OHDSI-tool - allows you to search and download the vocabulary
https://search.loinc.org – allows you to search LOINC concepts, that are the best standard for Measurement

#3

I think your answer will help us a lot.
Thanks you so much Dymshyus.

t