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The new Working Group for Hadoop

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(Shawn Dolley) #61

Hadoop Working Group members! Happy holidays. We had a meeting today. If you go to this link you will find a MS Word doc with the meeting notes from today: http://www.ohdsi.org/web/wiki/doku.php?id=projects:workgroups:hadoopwgmeetingloglandingpage

I will be working on multiple items:
a) making a link to survey results and making them more interpretable
b) doing next survey by 1/1
c) soliciting survey questions
d) arranging the demos-with-WG-meeting
e) setting up time for the SQL-SQLRender-merging question/topic we could not get to today
f) ensuring we can get the Achilles merge/CASTING question a forum to be worked out in
g) getting Derek Kane to do a video of the reference architecture
h) finding sustainable low-time investment way for me to get these Webex recordings posted or otherwise get meetings recorded, right now this is the most time-sink thing for me of all these


(Mui Van Zandt) #62

@shawndolley - I tried replying to your call to action email, but it came back as undeliverable. Do you have any slots open on either Feb 3rd or Feb 17th for the presentation? Thanks.


(Christian Reich) #63

I’ll send you the email address.


(Shawn Dolley) #64

Update on demo’s as of Jan 27, 2016. Happy holidays!

Here is our current line-up of demo’s (or PPT presentations) of what some of you have done with OHDSI/OMOP on Apache big data projects (like Hadoop) already.

Jan 6 – Jennifer Duryea (@jenniferduryea) from Outcomes Insights showing their product called Jigsaw

Jan 20 – open

Feb 3 – Corina Bennett (@corina_bennett) , Amgen

Feb 17 – Mui Van Zandt (@mvanzandt) , QuintilesIMS (now confirmed)

I am humbled by the fact that people responded so quickly,
so willing to share!

So yes, we have an open spot on Jan 20. Even a bit of code or a PPT with some screenshot, doesn’t need to be amazing, with so many other people presenting I am hoping for someone to jump in for the Jan 20 slot.

Please recall that our meetings are every other Friday at the info below (which is also on the Wiki for Hadoop WG). I am going to try again to figure out how to record these (due to some friendly nudging by Dr @jon_duke ).

1-650-479-3208,624188217 or
cloudera.webex.com/meet/sdolley


(Shawn Dolley) #65

Hadoopy People! Here is audio and video recording of the Hadoop Working Group meeting on November 11, 2016. Will also be posted to the wiki. This one, if I recall, includes Tom White showing some code he wrote. I am working on get the other recorded meeting we have posted as well.
Link here:


(Shawn Dolley) #66

Your friendly organizer here J
Happy New Year!! Yes I will post this on the forum! For those who like a ‘push’
model of info rather than pull … we have a full roster of ‘demo’s or ‘presentations’
for Hadoop as platform for OMOP!! Here is our current line-up of demo’s (or PPT
presentations) of what some of you have done with OHDSI/OMOP on Apache big data
projects (like Hadoop) already.

Jan 6 – Jennifer Duryea from Outcomes Insights showing their
product called Jigsaw

Jan 20 – Shamim ‘Sam’ Habib from Knowledgent showing their
Real World Evidence Cartridge

Feb 3 – Corina Bennett, Amgen

Feb 17 – Mui Van Zandt, QuintilesIMS

We will take a breather for a couple of meetings after those 4 to digest and work on current tech issues, etc. But BigOMOPapaLOOZA will be back with v2 I suspect in the spring.

You do not want to
miss any of these!!!
Thanks

Shawn


(Shawn Dolley) #67

Reminder: tomorrow, Jan 6 of 2017, @jenniferduryea will be showing some slides or a demo on the Outcomes Insight’s software called Jigsaw which leverages OHDSI OMOP CDM. Prospective agenda below, please give feedback on agenda if desired.

  1. Roll call and intro of new members (5 mins)
  2. Old business (10 mins hopefully, including a) testing b) SQLRender 2.0, c) other new tech requests)
  3. Outcomes Insights ‘Jigsaw’ - 30 minutes
  4. Q&A on Jigsaw - 10 mins
  5. Final thoughts and call outs from members - 5 mins
    This will be recorded and now I have a process to get it available as mp4.
    Huzzah!

(Urvi Shah) #68

@shawndolley I’m interested in joining the group and the call tomorrow. Is there a specific place I will need to call in?


(Shawn Dolley) #69

Hi Urvi, so great you may join us. Instructions to join are here:
http://www.ohdsi.org/web/wiki/doku.php?id=projects:workgroups:hadoop-wg

Shawn Dolley

Industry Leader, Health & Life Science

Cloudera

sdolley@cloudera.com

202-460-4660

@shawndolley


(Shawn Dolley) #70

Reminder:

People,Just a reminder on tomorrow’s every-two-week’s call we will have Shamim ‘Sam’ Habib and one other Knowledgent person demo’ing their real world evidence ‘cartridge’ which is like a solution or
accelerator. Maybe screen shots in slides or a live demo, I have not found out yet. Will be recorded and the Outcomes Insights demo of Jigsaw is recorded and available (see the wiki page). Hope to see you then. Info on logging in tomorrow is on the wiki and in the forum in this thread.


(Shawn Dolley) #71

Found out the Knowledgent guys doing a demonstration/presentation of their RWE solution today on the Hadoop Working Group call won’t be starting until half way through (8:30am PST/11:30am EST) rather than 15 minutes in. So if you are coming just for the demo, no need to come right when the call kicks off. Thanks.


(Don Torok) #72

Was the Hadoop Working Group meeting with the Knowledgent presentation recorded? If so where can one find it?


(Shawn Dolley) #73

Hey folks, a couple people have pinged me on this. I will make best attempt at getting the meeting video (including Knowledgent demo) up by midnight eastern today 1/24. Thanks for your patience.


(Shawn Dolley) #74

Dear Don,
It’s up on Youtube now:


(Shawn Dolley) #75

Folks,
The Knowledgent demo of their Real World Evidence software solution/solution accelerator is now up on Youtube. The link is:

A bit after halfway through this video is when Ari from Knowledgent comes on and does the demo.

Thanks
Shawn


(Shawn Dolley) #76

Hey folks, slight change of schedule. Original and new content schedules below for the ‘every 2 week’ Friday Hadoop/Big Data calls:
Original:
Jan 6 – Jennifer Duryea from Outcomes Insights showing their
product called Jigsaw

Jan 20 – Shamim ‘Sam’ Habib from Knowledgent showing their
Real World Evidence Cartridge

Feb 3 – Corina Bennett, Amgen

Feb 17 – Mui Van Zandt, QuintilesIMS

In the new agenda, Corina Bennett who was on for this Friday will actually be speaking/presenting later on (perhaps March). So for this week, we will be working - at the request of wider OHDSI sort of - plans/goals/hopes for 2017 for this group. I am aspiring to send out a surveymonkey before Friday, but if you could be thinking of what you want out of the group this year, and come willing to share on that topic, it would be super.


(Shawn Dolley) #77

Hi people. Latest: the Quintiles IMS presentation slides from the Feb 17 meeting are now posted to the Wiki working group page. I have updated the Member list to be ‘Active Members’. Next meeting scheduled for March 3. We don’t have a presentation scheduled, so if you want a time in the spotlight, let me know at sdolley at cloudera dot com.


(Shawn Dolley) #78

Quintiles IMS presentation now on Youtube at: https://youtu.be/QNvi-wmc8IM


(Jason Poovey) #79

Here is the link to the GT presentation on using Hadoop for our Analytics Platform from the OHDSI Face to Face. Thanks.


#80

Dear Shawn ,

@shawndolley , Thanks for your detail introduction.
Could you please add me in to the working group as well?

Bests,
Yu Jing (yujing5b5d#gmail.com)


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