This is of one longest existing topics on a forum, and I think to solve it, we lack a good use case, I’m actually surprised @Christian_Reich didn’t asked that before.
So maybe someone has a good use case of how they would like to analyze microbiology data? What research questions you want to ask?
This will help us to shape the data in the OMOP CDM.
It’s pretty much any ID question. What are the outcomes of patients with MRSA? Does one antibiotics work better than another? And the list goes on, including characterization, comparative effectiveness and quality measures.
I think All Of Us came up with a model for microbiology data they use, but I don’t know the details.