I am running Atlas 2.7.8 and I can login with no problems. I am also running Altas using https. WebAPI at https://hsc-ctsc-atlas.health.unm.edu/WebAPI/ reports:
{“payload”:{“cause”:null,“stackTrace”:[],“response”:{“context”:{“headers”:{},“entity”:null,“entityType”:null,“entityAnnotations”:[],“entityStream”:{“closed”:false,“committed”:false},“mediaType”:null,“lastModified”:null,“date”:null,“acceptableLanguages”:[""],“lengthLong”:-1,“responseCookies”:{},“entityClass”:null,“links”:[],“allowedMethods”:[],“stringHeaders”:{},“entityTag”:null,“requestCookies”:{},“acceptableMediaTypes”:[{“type”:"",“subtype”:"*",“parameters”:{},“quality”:1000,“wildcardType”:true,“wildcardSubtype”:true}],“committed”:false,“length”:-1,“language”:null,“location”:null},“status”:404,“entity”:null,“mediaType”:null,“lastModified”:null,“date”:null,“metadata”:{},“links”:[],“allowedMethods”:[],“stringHeaders”:{},“entityTag”:null,“statusInfo”:“NOT_FOUND”,“cookies”:{},“length”:-1,“language”:null,“location”:null,“headers”:{}},“message”:“HTTP 404 Not Found”,“localizedMessage”:“HTTP 404 Not Found”,“suppressed”:[]},“headers”:{“id”:“72bdde23-b246-ab50-0e8f-ca1e25204282”,“timestamp”:1625865697476}}
However, while I tried using the cdm example at:
At the database I got:
ohdsi=> select * from webapi.source;
source_id | source_name | source_key | source_connection | source_dialect | username | password | krb_auth_method | keytab_name | krb_keytab | krb_admin_server | deleted_date
-----------±------------±-----------±-------------------------------------------------------------------±---------------±----------±--------------±----------------±------------±-----------±-----------------±-------------
4 | Truven | truven | jdbc:postgresql://hsc-ctsc-data.health.unm.edu:5432/truven | postgresql | atlasuser | somepassword | PASSWORD | | | |
5 | My Cdm | MY_CDM | jdbc:postgresql://server:5432/cdm?user={user}&password={password} | postgresql | | | PASSWORD | | | |
(2 rows)
ohdsi=> select * from webapi.source_daimon;
source_daimon_id | source_id | daimon_type | table_qualifier | priority
------------------±----------±------------±------------------±---------
3 | 4 | 0 | mdcr2003_2016_oud | 0
4 | 5 | 0 | cdm | 0
5 | 5 | 1 | vocab | 1
6 | 5 | 2 | results | 1
7 | 5 | 5 | temp | 0
(5 rows)
and I can find the “My Cdm” at the https://hsc-ctsc-atlas.health.unm.edu/Atlas/#/configure page if I try pressing the Check button it becomes red. I used the insert commands listed at CDM Configuration · OHDSI/WebAPI Wiki · GitHub. On the other hand, for the Truven one, I entered the information through the Atlas configuration page and I can see it at the configure page. I am still not able to connect to the latter but if I use psql as with:
psql -U atlasuser -h hsc-ctsc-data.health.unm.edu -p 5432 truven
I am able to connect. What am I missing here?
Respect of truven, the logs do not report any connection problems and the “check” connection button is “green” or “orange” but stays at green.