Community Meeting 19May2015

Hello Everyone!

Here is the agenda for Tuesday’s community meeting:

  1. Introductions & Updates
  2. @Vojtech_Huser would like to present interim updates of his Achilles Heel analysis/paper
  3. Research updates - I would like to update this file: https://docs.google.com/spreadsheets/d/1BTjbPg7U6YdtPDUmY3lxRsJ0A4e4I6hWEy8iPxn--yA/edit?usp=sharing
    I’d like to get a status update on each publication, and add any new potential publications that aren’t already here
  4. Future presentations - Anyone else interested in sharing their work at an upcoming community meeting?

Details to join the meeting can be found here: http://www.ohdsi.org/web/wiki/doku.php?id=projects:ohdsi_community2

Deadlines are coming up for the following:

Publications:
BioMed Research International Special issue on ‘Knowledge
Engineering Methods and Applications in Pharmacovigilance’.
http://downloads.hindawi.com/journals/bmri/si/706947.pdf131
Papers due: 12 June 2015

International Journal of Epidemiology issue on metabolic phenotyping in epidemiology
http://www.oxfordjournals.org/our_journals/ije/call-for-papers-metabolic-phenotyping-epidemiology.html
Papers due: 30 June 2015

International Journal of Epidemiology Special issue: Metabolic
phenotyping in Epidemiology:
http://www.oxfordjournals.org/our_journals/ije/call-for-papers-metabolic-phenotyping-epidemiology.html12,
Papers due: 30 June 2015

Grants:
NIH Collaborative Innovation Award, Clinical and Translational
Science Award (CTSA) Program X02 URL:
http://grants.nih.gov/grants/guide/pa-files/PAR-15-173.html1, LOI due
24May2015, application due 24June2015

Conferences:
ISPOR - May 16th-20th
http://www.ispor.org/event/index/2015philadelphia

Atlantic Causal Inference Conference - May 20th/21st
http://www.med.upenn.edu/cceb/biostat/conferences/ACIC15/index_acic15.php

AcademyHealth - June 14th to 16th in Minneapolis
http://arm.academyhealth.org/home
Deadline to register: June 12th

If there is anything else you’d like to add, please reply to this thread

Have a great weekend!
Maura

Hi Maura,

For my row (Nigam Shah), the paper is under review at JAMIA. The final
title was: Learning statistical models of phenotypes using noisy labeled
training data. I couldn’t edit the online doc (says ‘view only’).

Two other efforts underway are:

Finding treatment pathways that associate with good outcomes (it’s a follow
on to the main treatment pathways paper, being written up).
Augmenting community phenotype models for local use (we have prelim results
… literally an hour after I said bye to Patrick on tuesday!).

regards,
nigam.

ps: so my total stack would be:

Nigam Shah (with Vibhu Agarwal) - Learning statistical models of phenotypes
using noisy labeled training data … under review at JAMIA
Nigam Shah (with Assaf Gottleib) - Finding treatment pathways that
associate with good outcomes
Nigam Shah (with Tanya Podchiyska) - Augmenting community phenotype models
for local use
Nigam Shah (with TBD) - building a phenotype model for familiar
hyperlipidemia (in collaboration with the FIND FH foundation).

Maura and All - I unfortunately will be traveling to ISPOR on Tues but I
have updated the spreadsheet for my TRIADS lab

Nigam - I would certainly be interested in trying to bring Pitt data
into the effort copied when you are ready to move it forward.

Ty,
-R

On Saturday, May 16, 2015, Rkboyce notifications@ohdsi.org wrote:

rkboyce <http://forums.ohdsi.org/users/rkboyce>

May 16

Maura and All - I unfortunately will be traveling to ISPOR on Tues but I
have updated the spreadsheet for my TRIADS lab

Nigam - I would certainly be interested in trying to bring Pitt data into
the effort copied when you are ready to move it forward.

Ty, -R

Hi Rich,

You have me a bit confused. What do you want to bring the Pitt data into? (
i.e Assaf’s project or FH?). For both of them, we’d be coding against the
OHDSI cdm v5 schema.

So I am missing something in understanding …

Regards,
Nigam.