I suggest reading both vignettes of the CohortMethod package (see the 'Getting Involved' section on the first page) .
analysisSummary is, as the name suggests, a summary of the analyses. This file is generated by analyzing the output of
runCmAnalysis. This output is also automatically stored as the file
outcomeModelReference.rds. It contains the names of the files used in the analysis for the various intermediary results. If you want to know which people were used in the final outcome model, you should load the files in the