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Dear LAERTES Team,
We plan to meet as a team this Wed 12/2 at 12 to discuss the following agenda items:
Finding a new meeting time … PLEASE COMPLETE THIS DOODLE - http://doodle.com/poll/b49d5ck5dzzs4u3z
Progress on current data update
Migrating data in RDF into the relational schema - motivation, progress, and discussion
Continue planning for this year (finish review of topics from F2F)
– publications
– user interface
– start work on the knowledge base
– Other items…
best,
-Rich
Dear LAERTES Team,
We will be meeting today (Wed 12/16) at 12 Eastern (telecon below). Here is a proposed agenda:
– progress on the data update, questions and answers
– user stories, experience, and a roadmap for the current user interface: http://ec2-52-3-251-1.compute-1.amazonaws.com/KnowledgeBaseWeb/
– Publications and grants
TELECON:
https://global.gotomeeting.com/join/530277469
Dial +1 (646) 749-3122
Access Code: 530-277-469
Audio PIN: Shown after joining the meeting
Meeting ID: 530-277-469
best,
-Rich
Rich I’m having trouble getting on at that dial in number. Is it correct?
Sorry to have missed you. There was some issues early on but they cleared up. Will post minutes soon...
Dear LAERTES Team,
We will be meeting today for the first time at our new time 3pm Eastern (telecon below). Here is a proposed agenda:
– progress on the data update
– questions and answers
– user stories, experience, and a roadmap for the current user interface: http://ec2-52-3-251-1.compute-1.amazonaws.com/KnowledgeBaseWeb/
– Publications and grants
TELECON:
Please join my meeting.
https://global.gotomeeting.com/join/530277469
Use your microphone and speakers (VoIP) - a headset is recommended. Or, call in using your telephone.
Dial +1 (646) 749-3122
Access Code: 530-277-469
Audio PIN: Shown after joining the meeting
Meeting ID: 530-277-469
best,
-Rich
Dear Team,
I am canceling the meetings this week on Tues 1/26 and Thurs 1/28 so I can focus on doing the LAERTES update/upgrade. Let’s continue discussions on the forum until we meet again:
About “modality”: LAERTES: Explaining modality
Animal and human evidence: LAERTES Inclusion of animal studies in drug-event pubmed extractions
thanks,-Rich
Dear Laertes Team,
Looking ahead to next week I unfortunately will need to cancel the meetings on Tues 2/9 and Thurs 2/11 because I am still working the LAERTES update/upgrade (delayed by competing projects). This upgrade and the review to follow is very much a per-requisite for completing our “architecture” paper. The next meeting after that will be on the 23rd. My apologies for holding the momentum back but it should be only temporary.
Dear LAERTES Team,
We will be meeting tomorrow at 3pm Eastern (telecon below ). There will be a “pick up” meeting for those who can’t join tomorrow’s meeting at 9am Thursday (same telecon info). Here is a proposed agenda:
– progress on the data update
– progress on the “Negative Control” extension to the prototype UI (https://github.com/OHDSI/KnowledgeBaseWeb) and
preparing a roadmap for revisions to the user interface by students at Pitt:: http://ec2-52-3-251-1.compute-1.amazonaws.com/KnowledgeBaseWeb/1
– linking DrugBank <-> chemical structure and protein targets <-> gene disease association <-> disease ontology <-> conditions
– Publications and grants
TELECON:
Please join my meeting.
https://global.gotomeeting.com/join/530277469
Use your microphone and speakers (VoIP) - a headset is recommended. Or, call in using your telephone.
Dial +1 (646) 749-3122
Access Code: 530-277-469
Audio PIN: Shown after joining the meeting
Meeting ID: 530-277-469
best,
-Rich
Dear LAERTES Team,
We will be meeting today at 3pm Eastern (new telecon info below ). There
will be a “pick up” meeting for those who can’t join tomorrow’s meeting
at 9am Thursday (same telecon info). Here is a proposed agenda:
A. Updates
B. User interface design - scenarios and requirements
Please join my meeting.
https://global.gotomeeting.com/join/530277469
Use your microphone and speakers (VoIP) - a headset is recommended. Or, call in using your telephone.
United States: +1 (224) 501-3217
Sweden: +46 (0) 853 527 836
Access Code: 530-277-469
Audio PIN: Shown after joining the meeting
Meeting ID: 530-277-469
Dear Friends, I will am canceling our LAERTES team meeting scheduled for 3/22 and 3/24 to focus on data updates. The update is moving forward now and should be done by 4/5. Also, we are planning to present on all LAERTES activity to the whole OHDSI collaborative on Tuesday 4/12.
Have a great week.
-Rich
Hi, next week the LAERTES team meeting will occur on Tuesday 5/3 at 3pm Eastern (pickup meeting Thursday at 9am Eastern). Here is the proposed agenda:
Indexing the updated LAERTES database to improve efficiency
Submitting the architecture manuscript to ICBO
Other topics TBD based on attendee interest
TELECON:
https://global.gotomeeting.com/join/530277469
United States: +1 (224) 501-3217
Sweden: +46 (0) 853 527 836
Access Code: 530-277-469
Hi, we will have one monthly LAERTES call for June on Thursday 6/30 at 9am Eastern (we had one scheduled for Tuesday 6/28 at 3pm Eastern but I cannot make that because of travel to OSEHRA). For those who can attend, we will focus on the Symposium submissions, LAERTES quality assurance and progress toward this year’s roadmap.
TELECON:
https://global.gotomeeting.com/join/530277469
United States: +1 (224) 501-3217
Sweden: +46 (0) 853 527 836
Access Code: 530-277-469
Audio PIN: Shown after joining the meeting
Meeting ID: 530-277-469
Dear Friends, I am canceling our LAERTES team meeting scheduled for 7/26 and 7/28 to focus on data updates and code refactoring. I will be in touch by email with certain team members throughout the week.
Have a great week.
-Rich
Dear Friends, I am canceling our LAERTES team meeting
scheduled for 8/23 and 8/25 because of travel. A sub-team is working on fixes in preparation for the symposium and also a submission to AMIA Joint Summits.
Have a great week.
-Rich
Dear Friends, I am canceling our LAERTES team meeting
scheduled for 9/20 and 9/22 because the OHDSI symposium is 9/23.
Hope to see you there!
Have a great week.
-Rich
LAERTES meeting tomorrow (Tuesday, 10/17)! After a break of a couple of months, our monthly LAERTES calls will be starting up again tomorrow. Telecon info below.
Planned agenda:
Updates on the evidence base
Testing the most recent evidence base update for the negative control use case
draft wireframe review for a new OHDSI drug-HOI association evidence explorer
Grant development: Extended Development, Hardening and
Dissemination of Technologies in Biomedical Computing, Informatics and Big
Data Science (R01)
TBD
. Please join my meeting.
https://global.gotomeeting.com/join/530277469
United States: +1 (224) 501-3217
Sweden: +46 (0) 853 527 836
Access Code: 530-277-469
Audio PIN: Shown after joining the meeting
Meeting ID: 530-277-469
Reminder that the Monthly LAERTES workgroup meets tomorrow (Tuesday, 11/14)! Telecon info below. Here is a possible agenda:
Testing the most recent evidence base update for the negative control use case
draft wireframe review for a new OHDSI drug-HOI association evidence explorer - integrating population level estimation and queries into patient data
Grant development: Extended Development, Hardening and
Dissemination of Technologies in Biomedical Computing, Informatics and Big
Data Science (R01)1
TBD
. Please join my meeting.
https://global.gotomeeting.com/join/530277469
Use your microphone and speakers (VoIP) - a headset is recommended. Or, call in using your telephone.
United States: +1 (224) 501-3217
Sweden: +46 (0) 853 527 836
Access Code: 530-277-469
Audio PIN: Shown after joining the meeting
Meeting ID: 530-277-469
Reminder that the Monthly LAERTES workgroup meets Tuesday, 12/13 at 3pm Eastern.
Telecon info below. Here is a possible agenda:
Testing the most recent evidence base update for the negative control use case
draft wireframe review for a new OHDSI drug-HOI association evidence explorer - integrating population level estimation and queries into patient data
new use cases LV Dysfunction and TK inhibitors, NOACs and brain hemorrhage
Grant development: Extended Development, Hardening and
Dissemination of Technologies in Biomedical Computing, Informatics and Big
Data Science (R01)1
TBD
. Please join my meeting.
https://global.gotomeeting.com/join/530277469
Use your microphone and speakers (VoIP) - a headset is recommended. Or, call in using your telephone.
United States: +1 (224) 501-3217
Sweden: +46 (0) 853 527 836
Access Code: 530-277-469
Audio PIN: Shown after joining the meeting
Meeting ID: 530-277-469
Reminder that the Monthly LAERTES workgroup meets Tuesday, 1/10 at 3pm Eastern.
Telecon info below. Here is a possible agenda:
Testing the most recent evidence base update for the negative control use case
wireframe review for a new OHDSI drug-HOI association evidence explorer - integrating population level estimation and queries into patient data
new use cases LV Dysfunction and TK inhibitors, NOACs and brain hemorrhage
Grant development: Extended Development, Hardening and
Dissemination of Technologies in Biomedical Computing, Informatics and Big
Data Science (R01)1
TBD
. Please join my meeting.
https://global.gotomeeting.com/join/530277469
Use your microphone and speakers (VoIP) - a headset is recommended. Or, call in using your telephone.
United States: +1 (224) 501-3217
Sweden: +46 (0) 853 527 836
Access Code: 530-277-469
Audio PIN: Shown after joining the meeting
Meeting ID: 530-277-469
Reminder that the Monthly LAERTES workgroup meets Tuesday, 3/7 at 3pm Eastern.
Telecon info below. Here is a possible agenda:
(Rich) continue discussion and work on new user interface design. Engage safety leads for initial feedback on the two use cases we have assembled
(Erica) come up with suggestions for refactoring the evidence base to allow for easy experimentation of alternative methods for each source
(Vojtech) - discussion of CT.gov inclusion - technical and usability feedback
(Sarah) - any questions about the drug - target data already in LAERTES from DrugBank - questions on Erica’s negative control paper
Planning for the OHDSI F2F
TBD
TELECON:
Please join my meeting.
https://global.gotomeeting.com/join/530277469
Use your microphone and speakers (VoIP) - a headset is recommended. Or, call in using your telephone.
United States: +1 (224) 501-3217
Sweden: +46 (0) 853 527 836
Access Code: 530-277-469
Audio PIN: Shown after joining the meeting
Meeting ID: 530-277-469