@jsjacobs, thanks for the inquery,
@Gowtham_Rao, thanks for the help with a simple approach description.
New ICD10CM concepts with corresponding mappings to SNOMED will be added to OMOP vocabulary
in the future.
I’m wondering how you ended up with 22% of missing conditions (maybe due to the specificity of your dataset), but ICD10CM added 2305 concepts in the last release, that is about 2.5 % of all the ICD10CM concept count.
The approach of @Gowtham_Rao is quite good, if you need this concepts before we add them officially to the vocabulary.
I want to note:
—Domain_id: better to put “Condition” as there are diseases mostly (A92.5 Zika virus disease, C49.A, Gastrointestinal stromal tumor, etc.), but if you don’t know - “Observation” is a best option.
— valid_start_date: “1-Oct-2016” – as the date when these concepts were added (and of course if you don’t know whether there are only new concepts, put “1-Jan-1970” as a valid_start_date.
And ICD 10 and ICD-10-CM are different vocabularies.
ICD 10 is WHO version (15297 concepts), and ICD-10-CM is the US extension (91737 concepts).