I’ve been trying all sorts of different covariate settings and getDbCovariateData parameters and I can’t remember what all else, but when I get to the point of trying to run createTable1 (or, sometimes before that in getDbCovariateData) I hit a wall.
The steps required with this nascent package to get to the points I’m talking about are:
clone the repo
A. this and the next step require a .env (dotenv) file with connection settings which should look sort of like this:
run the code in CodeToRun.R
At the moment I’m getting this error:
Error: Error executing SQL: cannot change working directory An error report has been created at /export/home/goldss/projects/HivDescriptive/errorReport.txt
while running the getDbCovariateData function. Depending on the order of running commands, this sometimes goes away.